Search for Cheap Deals on
Independent in Marathon

You choose what matters — star rating, location, amenities.

We pick the perfect hotel, packed with all your must-haves.

Your hotel is revealed right after booking!


Featured Marathon Independent

Kingsail Resort
Kingsail Resort
2 out of 5
7050 Overseas Highway, Marathon, FL
Stay at this motel in Marathon. Enjoy free WiFi, free parking, and a marina. Our guests praise the helpful staff and the clean rooms in our reviews. Popular ...
Kingsail Resort
Coconut Cay Resort & Marina
Coconut Cay Resort & Marina
2 out of 5
7196 Overseas Highway, Marathon, FL
Stay at this hotel in Marathon. Enjoy free WiFi, free parking, and a marina. Our guests praise the helpful staff and the clean rooms in our reviews. Popular ...
Coconut Cay Resort & Marina
Banana Bay Resort & Marina
Banana Bay Resort & Marina
3 out of 5
4590 Overseas Highway, Marathon, FL
Fully refundableReserve now, pay when you stay
Stay at this 3-star golf hotel in Marathon. Enjoy free breakfast, free parking, and a marina. Our guests praise the pool and the bar in our reviews. Popular ...
Banana Bay Resort & Marina
Captain Pips Marina & Hideaway
Captain Pips Marina & Hideaway
3 out of 5
1480 Overseas Hwy, Marathon, FL
Stay at this 3-star hotel in Marathon. Enjoy free WiFi, a marina, and free bicycles on site. Our guests praise the helpful staff and the clean rooms in our reviews. ...
Captain Pips Marina & Hideaway
Skipjack Resort & Marina
Skipjack Resort & Marina
3 out of 5
19 Sombrero Blvd, Marathon, FL
Fully refundableReserve now, pay when you stay
Stay at this 3-star golf aparthotel in Marathon. Enjoy free parking, a marina, and a fitness center. Our guests praise the breakfast and the pool in our reviews. ...
Skipjack Resort & Marina
Grassy Flats Resort & Beach Club
Grassy Flats Resort & Beach Club
2.5 out of 5
58182 Overseas Hwy, Marathon, FL
Fully refundableReserve now, pay when you stay
Book a stay at this beach hotel in Marathon. Enjoy free WiFi, free parking, and 2 outdoor pools. Our guests praise the helpful staff and the property condition ...
Grassy Flats Resort & Beach Club
Gulf View Waterfront Resort
Gulf View Waterfront Resort
2.5 out of 5
58743 OVERSEAS HWY, Marathon, FL
Stay at this hotel in Marathon. Enjoy free WiFi, free parking, and daily housekeeping. Our guests praise the helpful staff and the clean rooms in our reviews. ...
Gulf View Waterfront Resort
Conch Key Fishing Lodge and Marina
Conch Key Fishing Lodge and Marina
2.5 out of 5
3 North Conch Ave, Conch Key, Marathon, FL
Book a stay at this beach motel in Marathon. Enjoy free WiFi, free parking, and a private beach. Our guests praise the helpful staff and the clean rooms in our ...
Conch Key Fishing Lodge and Marina
Rainbow Bend Resort
Rainbow Bend Resort
2.5 out of 5
57784 Overseas Hwy, Marathon, FL
Fully refundableReserve now, pay when you stay
Book a stay at this beach hotel in Marathon. Enjoy a private beach, daily housekeeping, and a garden. Our guests praise the breakfast and the helpful staff in ...
Rainbow Bend Resort
Yacht Haven Marina
Yacht Haven Marina
3.5 out of 5
5 Sombrero Blvd, Marathon, FL
Stay at this 3.5-star houseboat in Marathon. Enjoy free WiFi, free parking, and a picnic area. Our guests praise the helpful staff in our reviews. Popular attractions ...
Yacht Haven Marina
Floating Sea Cove Resort & Marina
Floating Sea Cove Resort & Marina
2 out of 5
12685 Overseas Highway, Marathon, FL
Stay at this hotel in Marathon. Enjoy free parking and air conditioning. Our guests praise the helpful staff and the clean rooms in our reviews. Popular attractions ...
Floating Sea Cove Resort & Marina
Bonefish Bay Motel
Bonefish Bay Motel
2.5 out of 5
12565 Overseas Highway, Marathon, FL
Stay at this motel in Marathon. Enjoy free WiFi, free parking, and a marina. Our guests praise the helpful staff and the clean rooms in our reviews. Popular ...
Bonefish Bay Motel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Independent hotels in Marathon

You’ve already taken the guesswork out of your next vacation. You know you want a Independent hotel in Marathon. What can you say? You like their style, they’re in a good part of Marathon, and they never let you down. New bar in town? You’re the first one to check it out. Spiciest item on the menu? You can take the heat. But even the best gamblers hedge their bets. No matter how crazy good your trip is, you want something familiar waiting for you at the end of the day.

All in a name

We all have favorites. There’s nothing wrong with knowing what you like. You like to stay at Independent near , Marathon to do the tourist thing (because sometimes it is fun) and then hit up the places that aren’t on the map. And no matter what fun you get into, you have Independent hotels with their comfy beds and thoughtful amenities waiting to tuck you in.

As you like it

Have a price you want to stick to, so you can paint the town red? Maybe, it’s all about the hotel features. Who couldn’t use a hot tub? Pick your pleasure by:

  • Hotwire Hot Rate: Grab the Independent hotel in Marathon at an absolute steal. After you book it, we’ll tell you the hotel name. You might nab that 4-star hotel for a 2-star price.
  • Price: How low can we go? Quite low in fact. Check out our prices per night, starting at $123.
  • Amenities: Grab a cocktail at the lounge and maybe wander upstairs to the rooftop terrace—all the stuff that makes a great vacay.

You’ve already done the hard part—figuring out where you want to stay. Now it’s time to use the money you saved to let the real fun begin. Underground shows? Off-beat attractions? Rooftop escapes? The choice is yours. The only thing wonderfully predictable about this trip is the Independent room you’ll be staying in.