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San Juan Islands

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San Juan Islands Flights as Low as $194

Prices found within past 7 days. Prices and availability subject to change. Additional terms may apply.

Spirit Airlines
Tue, May 6 - Sat, May 17
IAH
George Bush Intercontinental
SEA
Seattle - Tacoma Intl.
$194 Roundtrip, found 6 days ago
$194
Roundtrip
found 6 days ago
Select Spirit Airlines flight, departing Tue, May 6 from George Bush Intercontinental to Seattle - Tacoma Intl., returning Sat, May 17, priced at $194 found 6 days ago
Spirit Airlines
Wed, May 7 - Sat, May 17
IAH
George Bush Intercontinental
SEA
Seattle - Tacoma Intl.
$195 Roundtrip, found 6 days ago
$195
Roundtrip
found 6 days ago
Select Spirit Airlines flight, departing Wed, May 7 from George Bush Intercontinental to Seattle - Tacoma Intl., returning Sat, May 17, priced at $195 found 6 days ago
Spirit Airlines
Sat, May 17 - Tue, May 20
IAH
George Bush Intercontinental
SEA
Seattle - Tacoma Intl.
$197 Roundtrip, found 5 days ago
$197
Roundtrip
found 5 days ago
Select Spirit Airlines flight, departing Sat, May 17 from George Bush Intercontinental to Seattle - Tacoma Intl., returning Tue, May 20, priced at $197 found 5 days ago
Spirit Airlines
Tue, May 6 - Tue, May 20
IAH
George Bush Intercontinental
SEA
Seattle - Tacoma Intl.
$198 Roundtrip, found 6 days ago
$198
Roundtrip
found 6 days ago
Select Spirit Airlines flight, departing Tue, May 6 from George Bush Intercontinental to Seattle - Tacoma Intl., returning Tue, May 20, priced at $198 found 6 days ago
Spirit Airlines
Tue, May 20 - Wed, May 21
IAH
George Bush Intercontinental
SEA
Seattle - Tacoma Intl.
$198 Roundtrip, found 5 days ago
$198
Roundtrip
found 5 days ago
Select Spirit Airlines flight, departing Tue, May 20 from George Bush Intercontinental to Seattle - Tacoma Intl., returning Wed, May 21, priced at $198 found 5 days ago
Frontier Airlines
Mon, May 5 - Sat, May 10
IAH
George Bush Intercontinental
SEA
Seattle - Tacoma Intl.
$198 Roundtrip, found 2 days ago
$198
Roundtrip
found 2 days ago
Select Frontier Airlines flight, departing Mon, May 5 from George Bush Intercontinental to Seattle - Tacoma Intl., returning Sat, May 10, priced at $198 found 2 days ago
Spirit Airlines
Tue, Jun 3 - Tue, Jun 10
IAH
George Bush Intercontinental
SEA
Seattle - Tacoma Intl.
$203 Roundtrip, just found
$203
Roundtrip
just found
Select Spirit Airlines flight, departing Tue, Jun 3 from George Bush Intercontinental to Seattle - Tacoma Intl., returning Tue, Jun 10, priced at $203 just found
Spirit Airlines
Sat, May 17 - Sun, May 18
IAH
George Bush Intercontinental
SEA
Seattle - Tacoma Intl.
$206 Roundtrip, found 5 days ago
$206
Roundtrip
found 5 days ago
Select Spirit Airlines flight, departing Sat, May 17 from George Bush Intercontinental to Seattle - Tacoma Intl., returning Sun, May 18, priced at $206 found 5 days ago
Frontier Airlines
Mon, May 5 - Mon, May 12
IAH
George Bush Intercontinental
SEA
Seattle - Tacoma Intl.
$208 Roundtrip, found 2 days ago
$208
Roundtrip
found 2 days ago
Select Frontier Airlines flight, departing Mon, May 5 from George Bush Intercontinental to Seattle - Tacoma Intl., returning Mon, May 12, priced at $208 found 2 days ago
United
Mon, May 5 - Sat, May 10
IAH
George Bush Intercontinental
SEA
Seattle - Tacoma Intl.
$267 Roundtrip, found 2 days ago
$267
Roundtrip
found 2 days ago
Select United flight, departing Mon, May 5 from George Bush Intercontinental to Seattle - Tacoma Intl., returning Sat, May 10, priced at $267 found 2 days ago
Delta
Wed, May 28 - Thu, Jun 5
IAH
George Bush Intercontinental
SEA
Seattle - Tacoma Intl.
$277 Roundtrip, just found
$277
Roundtrip
just found
Select Delta flight, departing Wed, May 28 from George Bush Intercontinental to Seattle - Tacoma Intl., returning Thu, Jun 5, priced at $277 just found
American Airlines
Mon, May 5 - Sat, May 10
IAH
George Bush Intercontinental
SEA
Seattle - Tacoma Intl.
$277 Roundtrip, found 2 days ago
$277
Roundtrip
found 2 days ago
Select American Airlines flight, departing Mon, May 5 from George Bush Intercontinental to Seattle - Tacoma Intl., returning Sat, May 10, priced at $277 found 2 days ago
Alaska Airlines
Mon, May 5 - Mon, May 12
IAH
George Bush Intercontinental
SEA
Seattle - Tacoma Intl.
$277 Roundtrip, found 2 days ago
$277
Roundtrip
found 2 days ago
Select Alaska Airlines flight, departing Mon, May 5 from George Bush Intercontinental to Seattle - Tacoma Intl., returning Mon, May 12, priced at $277 found 2 days ago
Hawaiian Airlines
Tue, May 13 - Mon, May 19
IAH
George Bush Intercontinental
SEA
Seattle - Tacoma Intl.
$278 Roundtrip, found 6 days ago
$278
Roundtrip
found 6 days ago
Select Hawaiian Airlines flight, departing Tue, May 13 from George Bush Intercontinental to Seattle - Tacoma Intl., returning Mon, May 19, priced at $278 found 6 days ago
Frontier Airlines
Mon, Jun 2 - Mon, Jun 9
IAH
George Bush Intercontinental
PAE
Seattle Paine Field Intl. Airport
$312 Roundtrip, found 5 days ago
$312
Roundtrip
found 5 days ago
Select Frontier Airlines flight, departing Mon, Jun 2 from George Bush Intercontinental to Seattle Paine Field Intl. Airport, returning Mon, Jun 9, priced at $312 found 5 days ago
Hawaiian Airlines
Tue, May 6 - Fri, May 9
IAH
George Bush Intercontinental
BLI
Bellingham Intl.
$394 Roundtrip, found 21 hours ago
$394
Roundtrip
found 21 hours ago
Select Hawaiian Airlines flight, departing Tue, May 6 from George Bush Intercontinental to Bellingham Intl., returning Fri, May 9, priced at $394 found 21 hours ago

Cheap Flights to San Juan Islands

Fall in love at first flight with your vacation to San Juan Islands by saving a ton of cash on your last-minute cheap flight. There’s no more scouring the internet for a good deal—book your flight to San Juan Islands on Hotwire, and you’ll be up, up, and on a getaway in no time.

Because once the wheels are down in San Juan Islands, the good times start rolling. So buckle up, you’re in for a fun ride.

Frequently Asked Questions About flights to San Juan Islands

Don’t waste your time on endless searches for cheap airline tickets oneway or roundtrip. We’ll have you on your way to San Juan Islands with a tiny bag of pretzels in your hand before you can say “tray tables in the upright position”—and for a ticket price that works for your vacay budget.

So all you have to worry about is where you’re headed after the SEA airport.

What is the cheapest month to fly to San Juan Islands?

Airline ticket prices fluctuate all the time, depending on the day of the week or the month of the year. The cheapest round trip flights to San Juan Islands are in May, but when you book your flight on Hotwire, savings are always in season.

How many airlines fly to San Juan Islands?

Variety is the spice of life, even when it comes to booking your next trip. Want options for airlines? You’ll find 16 to choose from for your flight to San Juan Islands.

What airport is best to fly into San Juan Islands?

When you’re planning your trip to San Juan Islands, convenience is the name of the game. Luckily, San Juan Islands Deer Harbor Seaplane Base Airport is nearby so you can deplane and get going on checking off everything on your San Juan Islands must-do list.

How much are flights to San Juan Islands?

Got very cheap flights on your vacation itinerary? When you book your airline tickets to San Juan Islands on Hotwire, you may just get what’s on your getaway wish list. With tickets as low as $194, you’ll have leftover cash for at least a magazine and a bottle of water at the airport book store.

How to get cheap flights to San Juan Islands?

The trick to saving a stack of cash on your flight to San Juan Islands? Snatch up that Hotwire flight deal when you see a killer rate because it could be gone in a flash. And with flights as low as $194 right now, why wait?

San Juan Islands Flight Information
Destination airport
Seattle - Tacoma Intl.
Destination airport IATA code
SEA
Roundtrip price
$148

Last Minute Hotel Deals in San Juan Islands

Friday Harbor Suites
Friday Harbor Suites
2.5 out of 5
680 Spring Street, Friday Harbor, WA
The price is $220 per night from May 11 to May 12
$220
includes taxes & fees
May 11 - May 12
Stay at this hotel in Friday Harbor. Enjoy free WiFi, free parking, and a free ferry terminal shuttle. Our guests praise the helpful staff and the clean rooms ...
8.2/10 Very Good! (959 reviews)
"Quiet and comfortable stay, and waking distance to Friday Harbor museums, shops and dining."

Reviewed on Apr 9, 2025

Friday Harbor Suites
The Orca Inn
The Orca Inn
2 out of 5
770 Mullis St., Friday Harbor, WA
The price is $111 per night from Apr 15 to Apr 16
$111
includes taxes & fees
Apr 15 - Apr 16
Stay at this motel in Friday Harbor. Enjoy free WiFi, free parking, and a picnic area. Our guests praise the helpful staff and the clean rooms in our reviews. ...
7.6/10 Good! (951 reviews)
"Easy check in"

Reviewed on Apr 1, 2025

The Orca Inn
Inn to the Woods B&B
Inn to the Woods B&B
3.5 out of 5
46 Elena Drive, Friday Harbor, WA
Stay at this 3.5-star B&B in Friday Harbor. Enjoy free breakfast, free WiFi, and free parking. Popular attractions Reuben Tarte Memorial Park and Mt. Grant Preserve ...
9.6/10 Exceptional! (78 reviews)
"Very comfortable and cozy. Great host. Good communication and very welcoming. Access is a bit difficult if you have mobility issues but they were very accommodating to allow us to use a different access"

Reviewed on Nov 11, 2024

Get rates
Inn to the Woods B&B
Snug Harbor Resort
Snug Harbor Resort
2.5 out of 5
1997 Mitchell Bay Rd, Friday Harbor, WA
The price is $249 per night from Apr 29 to Apr 30
$249
includes taxes & fees
Apr 29 - Apr 30
Stay at this hotel in Friday Harbor. Enjoy free WiFi, free parking, and a marina. Our guests praise the helpful staff in our reviews. Popular attractions English ...
9.8/10 Exceptional! (366 reviews)
Absolutely Exceptional
"Snug Harbor offers an absolutely premium experience at a tremendous value. The location of the resort perfectly captures the essence and beauty of the San Juan Islands, and the quality, cleanliness, and attention to detail is unparalleled. Along with that, the staff make you feel right at home from ..."

Reviewed on Apr 11, 2025

Snug Harbor Resort
Earthbox Inn & Spa
Earthbox Inn & Spa
2.5 out of 5
410 Spring Street, Friday Harbor, WA
The price is $238 per night from Apr 15 to Apr 16
$238
includes taxes & fees
Apr 15 - Apr 16
Book a stay at this spa hotel in Friday Harbor. Enjoy free WiFi, free parking, and a full-service spa. Our guests praise the helpful staff and the clean rooms ...
8.6/10 Excellent! (884 reviews)
"Nice and clean; friendly staff."

Reviewed on Apr 10, 2025

Earthbox Inn & Spa
Roche Harbor Resort
Roche Harbor Resort
3 out of 5
248 Reuben Memorial Dr, Friday Harbor, WA
The price is $258 per night from Apr 17 to Apr 18
$258
includes taxes & fees
Apr 17 - Apr 18
Stay at this 3-star spa resort in Friday Harbor. Enjoy an outdoor pool, a full-service spa, and 3 restaurants. Popular attractions Roche Harbor Marina and San ...
9/10 Wonderful! (374 reviews)
"Bathroom was nice 😆😄"

Reviewed on Apr 5, 2025

Roche Harbor Resort
Lopez Islander Resort
Lopez Islander Resort
3.5 out of 5
2864 Fisherman Bay Rd, Lopez Island, WA
The price is $198 per night from Apr 15 to Apr 16
$198
includes taxes & fees
Apr 15 - Apr 16
Stay at this 3.5-star hotel in Lopez Island. Enjoy free WiFi, free parking, and an outdoor pool. Our guests praise the helpful staff in our reviews. Popular ...
8.4/10 Very Good! (322 reviews)
"It was quiet and well maintained!"

Reviewed on Mar 28, 2025

Lopez Islander Resort
Outlook Inn
Outlook Inn
3 out of 5
171 Main St, Eastsound, WA
The price is $391 per night from Apr 15 to Apr 16
$391
includes taxes & fees
Apr 15 - Apr 16
Stay at this 3-star hotel in Eastsound. Enjoy free WiFi, 2 meeting rooms, and daily housekeeping. Our guests praise the helpful staff in our reviews. Popular ...
9/10 Wonderful! (460 reviews)
"Excellent location. Beautiful room."

Reviewed on Mar 27, 2025

Outlook Inn
See all 549 properties in San Juan Islands
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Top Hotels With Free Airport Shuttle

Earthbox Inn & Spa
Earthbox Inn & Spa
2.5 out of 5
410 Spring Street, Friday Harbor, WA
The price is $238 per night from Apr 15 to Apr 16
$238
includes taxes & fees
Apr 15 - Apr 16
Book a stay at this spa hotel in Friday Harbor. Enjoy free WiFi, free parking, and a full-service spa. Our guests praise the helpful staff and the clean rooms ...
8.6/10 Excellent! (884 reviews)
"Nice and clean; friendly staff."

Reviewed on Apr 10, 2025

Earthbox Inn & Spa
See all 549 properties in San Juan Islands
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.