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Hotels in Yankton

Choose from 95 Yankton Hotel Deals

Yankton Inn
Yankton Inn
2 out of 5
1603 East Highway 50, Yankton, SD
  • 12 min drive from Lewis and Clark Recreation Area
Book a stay at this business-friendly hotel in Yankton. Enjoy free breakfast, free WiFi, and free parking. Our guests praise the helpful staff in our reviews. ...
7.2/10 Good! (222 reviews)
Impressive for newly renovated motel
"Overall, it was quite good for the newly renovated motel, which previously resembled a Super 8. Everything is very convenient. Just that the water pressure for the shower might need some gain. :-)"

Reviewed on Jul 7, 2025

Yankton Inn
Best Western Kelly Inn
Best Western Kelly Inn
2.5 out of 5
1607 E Highway 50, Yankton, SD
  • 12 min drive from Lewis and Clark Recreation Area
Book a stay at this business-friendly hotel in Yankton. Enjoy free breakfast, free WiFi, and free parking. Our guests praise the helpful staff in our reviews. ...
8/10 Very Good! (601 reviews)
"Always the best stay when i come into town for fishing trip. Thank you!"

Reviewed on Jul 3, 2025

Best Western Kelly Inn
Fairfield Inn & Suites by Marriott Yankton
Fairfield Inn & Suites by Marriott Yankton
2.5 out of 5
508 WEST 21ST STREET, Yankton, SD
  • 10 min drive from Lewis and Clark Recreation Area
Stay at this hotel in Yankton. Enjoy free breakfast, free parking, and a 24-hour front desk. Our guests praise the helpful staff in our reviews. Popular attractions ...
9.4/10 Exceptional! (131 reviews)
"Employees went out of there way to be sure we were happy with our room and pool"

Reviewed on Jul 6, 2025

Fairfield Inn & Suites by Marriott Yankton
Lewis and Clark Resort
Lewis and Clark Resort
2.5 out of 5
43496 Shore Drive, Yankton, SD
  • 2 min walk from Lewis and Clark Recreation Area
Book a stay at this beach hotel in Yankton. Enjoy free WiFi, free parking, and an outdoor pool. Popular attractions Lewis and Clark Recreation Area and Midway ...
8.6/10 Excellent! (225 reviews)
"Beautiful place, rooms are very outdated but at least clean. Very friendly staff and beautiful beaches"

Reviewed on Jul 3, 2025

Lewis and Clark Resort
Econo Lodge Inn & Suites
Econo Lodge Inn & Suites
2 out of 5
2410 Broadway Ave, Yankton, SD
  • 10 min drive from Lewis and Clark Recreation Area
Book a stay at this business-friendly hotel in Yankton. Enjoy free breakfast, free WiFi, and free parking. Popular attractions Fox Run Plaza and Augusta Park ...
7.2/10 Good! (659 reviews)
"The workers were delightful and very friendly. The rooms were adequate. Actually ironically the toilet paper was superb which is a funny way to judge how much a hotel cares about you. But maintenance of the place is very poor. The rugs are disgusting. The pool though indoor wasn't even heated. The ..."

Reviewed on Jun 22, 2025

Econo Lodge Inn & Suites
Comfort Inn Yankton SD
Comfort Inn Yankton SD
2.5 out of 5
611 W 23rd Street, Yankton, SD
  • 10 min drive from Lewis and Clark Recreation Area
Book a stay at this business-friendly hotel in Yankton. Enjoy free breakfast, free WiFi, and free parking. Our guests praise the helpful staff in our reviews. ...
8.6/10 Excellent! (608 reviews)
"Just overall nice property; nice location - will be back"

Reviewed on Jul 5, 2025

Comfort Inn Yankton SD
Holiday Inn Express & Suites Yankton by IHG
Holiday Inn Express & Suites Yankton by IHG
2.5 out of 5
2607 Broadway Ave, Yankton, SD
  • 11 min drive from Lewis and Clark Recreation Area
Book a stay at this business-friendly hotel in Yankton. Enjoy free breakfast, free WiFi, and free parking. Our guests praise the helpful staff in our reviews. ...
9.2/10 Wonderful! (395 reviews)
"Great staff! Great facilities!"

Reviewed on Jun 9, 2025

Holiday Inn Express & Suites Yankton by IHG
Downtown Yankton Apartment w/ Patio & River View!
Downtown Yankton Apartment w/ Patio & River View!
3 out of 5
Yankton
  • 10 min drive from Lewis and Clark Recreation Area
Stay at this 3-star apartment in Yankton. Enjoy free parking and air conditioning. Popular attractions Riverside Park Amphitheatre and Riverside Park are located ...
Downtown Yankton Apartment w/ Patio & River View!
Family-friendly Lakeview Cottage w/ Deck & View
Family-friendly Lakeview Cottage w/ Deck & View
3 out of 5
Yankton
  • 9 min walk from Lewis and Clark Recreation Area
Stay at this 3-star family-friendly cottage in Yankton. Enjoy free parking, a marina, and balconies. Popular attractions Midway Recreation Area and Lewis and ...
Family-friendly Lakeview Cottage w/ Deck & View
Modern Yankton Apartment Near Riverside Park!
Modern Yankton Apartment Near Riverside Park!
3 out of 5
Yankton
  • 9 min drive from Lewis and Clark Recreation Area
Stay at this 3-star apartment in Yankton. Enjoy air conditioning. Popular attractions G.A.R. Hall and Riverside Park Amphitheatre are located nearby.
Modern Yankton Apartment Near Riverside Park!
Pet-friendly Apt: 2 Blocks to Riverside Park!
Pet-friendly Apt: 2 Blocks to Riverside Park!
3 out of 5
Yankton
  • 9 min drive from Lewis and Clark Recreation Area
Stay at this 3-star apartment in Yankton. Enjoy free parking and air conditioning. Popular attractions G.A.R. Hall and Riverside Park Amphitheatre are located ...
Pet-friendly Apt: 2 Blocks to Riverside Park!
Pet-friendly Apt: Walk to Missouri River!
Pet-friendly Apt: Walk to Missouri River!
3 out of 5
Yankton
  • 9 min drive from Lewis and Clark Recreation Area
Stay at this 3-star apartment in Yankton. Enjoy free parking, snorkeling on site, and in-room fireplaces. Popular attractions G.A.R. Hall and Riverside Park ...
Pet-friendly Apt: Walk to Missouri River!
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Find cheap hotels in Yankton

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For you, intrepid voyager, Hotwire has a large selection of the best hotels in Yankton.

Choosing the right hotel in South Dakota has everything to do with the way you want your trip to go. If you’ve scribbled a few obscure destinations on your itinerary, you probably already have a good sense of how your getaway is taking shape. Lean into that by booking one of Yankton’s 95 hotels. Choose the one that best catches your trip’s tourist drift.

If you’re traveling during the week for business, Hotwire can score you a luxury hotel for as low as $94. In town for pleasure? Hotwire still has you covered. If you’re in the mood for a quick last-minute weekend getaway or spa retreat, you can get great Yankton hotel deals at the last minute.

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Frequently Asked Questions About Yankton hotels

Where can I find the best last-minute travel deals?

If you’re traveling in the spirit of spontaneity, you’ll love the idea of leaving your exact hotel choice up to chance. With Hotwire Hot Rates, you can unlock great deals on your next flight, hotel, or car rental. Just plug in your general preferences and let Hotwire choose last-minute hotel deals in Yankton for as low as $94.

How many hotels are there in Yankton?

With over 95 hotels in Yankton, you’re sure to find one that best matches your travel mood. When you book with Hotwire, you can score a stellar home away from home for as low as $94.

How to find cheap car rentals in Yankton?

Finding a cheap car rental deal in Yankton is as easy as scoring cheap hotels in Yankton. Hotwire partners with top-of-the-line car rental companies to bring you a large selection of affordable options. Whether you’re in need of a large SUV for the entire family or a more compact but stylish vehicle, Hotwire has you covered. You can unlock great car rental deals if you book a Hotwire Hot Rate at the last minute.