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Choose from 866 San Juan Island Hotel Deals
The Orca Inn
"Feel like staying in a big cargo container. Good for one or two nights."
Reviewed on Oct 17, 2026
Friday Harbor Suites
Inn to the Woods B&B
"The home was charming and James was an excellent host! We enjoyed the atmosphere and their wonderful pets that would greet us. The breakfast that was served to us each morning was terrific! Would definitely stay again!"
Reviewed on Oct 2, 2026
Discovery Inn
"It was nice as advertised. Great updated in."
Reviewed on Oct 28, 2026
Snug Harbor Resort
"Great, quaint, and rustic place to stay just 15 minutes from Friday Harbor. A very quiet, peaceful, and charming resort, ideal for anyone wanting an amazing stay on San Juan Island, away from Friday Harbor. Very well maintained, with friendly staff and fantastic seating. What a winning ..."
Reviewed on Oct 27, 2026
Earthbox Inn & Spa
Roche Harbor Resort
"We had a wonderful stay. Very pretty and peaceful."
Reviewed on Oct 12, 2026
Tucker House Inn
"Will be staying again. Loved it"
Reviewed on Oct 27, 2026
Friday Harbor House
Trumpeter Inn
Bird Rock Hotel
Rosario Resort
"We were there in late October. We didn't get booked at the main resort building but at one of the side buildings. (no pool or hot tub facilities open). The restaurant at one of the other side buildings was elegant but we didn't have many vegetarian options available so we had an over priced fish ..."
Reviewed on Oct 28, 2026
Find cheap hotels in San Juan Island
You’re not an average traveler—and Hotwire knows it. Your wanderlust takes you off the beaten path to discover unique adventures and every travel destination’s lesser-known tourist scenes. Hotwire has the hookup! Book your San Juan Island hotel with Hotwire to complete your one-of-a-kind travel checklist.
For you, intrepid voyager, Hotwire has a large selection of the best hotels in San Juan Island.
Choosing the right hotel in Washington has everything to do with the way you want your trip to go. If you’ve scribbled a few obscure destinations on your itinerary, you probably already have a good sense of how your getaway is taking shape. Lean into that by booking one of San Juan Island’s 866 hotels. Choose the one that best catches your trip’s tourist drift.
If you’re traveling during the week for business, Hotwire can score you a luxury hotel for as low as $133. In town for pleasure? Hotwire still has you covered. If you’re in the mood for a quick last-minute weekend getaway or spa retreat, you can get great San Juan Island hotel deals at the last minute.
While traveling, where you stay plays a major role in your overall vacation enjoyment. Choosing the right hotel is just as important as making sure you book the right flight and car rental. If you’re traveling with family or friends, you may need to book a hotel with connecting rooms. If you enjoy an elegant and relaxing hotel ambiance, opt for one of Hotwire’s luxury hotels in San Juan Island. No matter your reason for visiting San Juan Island, with Hotwire’s large selection of hotels in the area, you’re sure to book a hotel that meets all your accommodation needs.
Frequently Asked Questions About San Juan Island hotels
Where can I find the best last-minute travel deals?
If you’re traveling in the spirit of spontaneity, you’ll love the idea of leaving your exact hotel choice up to chance. With Hotwire Hot Rates, you can unlock great deals on your next flight, hotel, or car rental. Just plug in your general preferences and let Hotwire choose last-minute hotel deals in San Juan Island for as low as $133.
How many hotels are there in San Juan Island?
With over 866 hotels in San Juan Island, you’re sure to find one that best matches your travel mood. When you book with Hotwire, you can score a stellar home away from home for as low as $133.
How to find cheap car rentals in San Juan Island?
Finding a cheap car rental deal in San Juan Island is as easy as scoring cheap hotels in San Juan Island. Hotwire partners with top-of-the-line car rental companies to bring you a large selection of affordable options. Whether you’re in need of a large SUV for the entire family or a more compact but stylish vehicle, Hotwire has you covered. You can unlock great car rental deals if you book a Hotwire Hot Rate at the last minute.
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