Search for Cheap Deals on
Hotels in San Ysidro

Check Last Minute San Ysidro Hotel Deals

Tonight Feb 28 - Mar 1Next weekend Mar 6 - Mar 8

Choose from 6219 San Ysidro Hotel Deals

Paradise Point Resort & Spa

Paradise Point Resort & Spa

4 out of 5
1404 Vacation Rd San Diego CA
  • 40 min drive from San Ysidro Border Crossing
Book a stay at this beach resort in San Diego. Enjoy free WiFi, 5 outdoor pools, and a full-service spa. Our guests praise the pool and the helpful staff in ...
8.8/10 Excellent! (2,430 reviews)
Great family place to stay.

Reviewed on Feb 25, 2026

Paradise Point Resort & Spa
Bay Club Hotel & Marina

Bay Club Hotel & Marina

3.5 out of 5
2131 Shelter Island Dr San Diego CA
  • 31 min drive from San Ysidro Border Crossing
Book a stay at this business-friendly hotel in San Diego. Enjoy free WiFi, a marina, and a health club. Our guests praise the breakfast and the restaurant in ...
9.2/10 Wonderful! (3,428 reviews)
The rooms are spotless with very comfortable beds. The staff is very friendly and helpful. The location on Shelter Island is great.

Reviewed on Feb 28, 2026

Bay Club Hotel & Marina
Hard Rock Hotel San Diego

Hard Rock Hotel San Diego

4 out of 5
207 5th Ave San Diego CA
  • 28 min drive from San Ysidro Border Crossing
Stay at this hotel in San Diego. Enjoy free WiFi, 2 restaurants, and a nightclub. Our guests praise the helpful staff and the convenient parking in our reviews. ...
9/10 Wonderful! (3,357 reviews)
Loved it

Reviewed on Feb 28, 2026

Hard Rock Hotel San Diego
The DEXTRO Little Italy, BW Premier Collection

The DEXTRO Little Italy, BW Premier Collection

3 out of 5
1617 1st Avenue San Diego CA
  • 31 min drive from San Ysidro Border Crossing
Book a stay at this business-friendly hotel in San Diego. Enjoy free WiFi, breakfast (surcharge), and a 24-hour fitness center. Our guests praise the helpful ...
9/10 Wonderful! (1,133 reviews)
Enjoyed my stay at The Dextro. The staff was awesome, and the vibe was great. Will book again in the future.

Reviewed on Feb 27, 2026

The DEXTRO Little Italy, BW Premier Collection
Best Western Seven Seas

Best Western Seven Seas

3 out of 5
411 Hotel Circle South San Diego CA
  • 37 min drive from San Ysidro Border Crossing
Book a stay at this business-friendly hotel in San Diego. Enjoy free WiFi, free parking, and 2 hot tubs. Our guests praise the pool and the restaurant in our ...
7.8/10 Good! (3,247 reviews)
Comfy bed, nice gym

Reviewed on Feb 27, 2026

Best Western Seven Seas
Days Inn by Wyndham San Diego Hotel Circle

Days Inn by Wyndham San Diego Hotel Circle

3 out of 5
543 Hotel Circle S San Diego CA
  • 37 min drive from San Ysidro Border Crossing
Book a stay at this business-friendly hotel in San Diego. Enjoy free WiFi, a fitness center, and parking (surcharge). Our guests praise the helpful staff and ...
8/10 Very Good! (2,508 reviews)
Great staff, the rooms were very clean, and it was quiet.

Reviewed on Feb 27, 2026

Days Inn by Wyndham San Diego Hotel Circle
San Diego Mission Bay Resort

San Diego Mission Bay Resort

4 out of 5
1775 E Mission Bay Dr San Diego CA
  • 40 min drive from San Ysidro Border Crossing
Book a stay at this beach hotel in San Diego. Enjoy free WiFi, a full-service spa, and 2 restaurants. Our guests praise the pool and the helpful staff in our ...
8.4/10 Very Good! (1,347 reviews)
The room, bathroom in particular, was well worn making it look almost dirty. And, the beds were the most uncomfortable things I've ever stayed on. Truly, that was 3 of the worst nights of rest I've had in a long time.

Reviewed on Feb 23, 2026

San Diego Mission Bay Resort
The Sofia Hotel

The Sofia Hotel

3.5 out of 5
150 W Broadway San Diego CA
  • 30 min drive from San Ysidro Border Crossing
Book a stay at this historic hotel in San Diego. Enjoy free WiFi, room service, and a 24-hour fitness center. Our guests praise the helpful staff and the clean ...
8.6/10 Excellent! (1,788 reviews)
Clean room and good location. Room was small though.

Reviewed on Feb 28, 2026

The Sofia Hotel
Hampton Inn & Suites by Hilton San Diego SeaWorld

Hampton Inn & Suites by Hilton San Diego SeaWorld

3 out of 5
3888 Greenwood St San Diego CA
  • 37 min drive from San Ysidro Border Crossing
Book a stay at this business-friendly hotel in San Diego. Enjoy free breakfast, free WiFi, and a fitness center. Popular attractions Mission Bay and Port of ...
9.2/10 Wonderful! (677 reviews)
Cleaned , good Breakfast and Affordable

Reviewed on Feb 27, 2026

Hampton Inn & Suites by Hilton San Diego SeaWorld
Wyndham San Diego Bayside

Wyndham San Diego Bayside

4 out of 5
1355 N Harbor Drive San Diego CA
  • 30 min drive from San Ysidro Border Crossing
Book a stay at this business-friendly hotel in San Diego. Enjoy free WiFi, 3 restaurants, and breakfast (surcharge). Our guests praise the pool and the restaurant ...
8.4/10 Very Good! (6,057 reviews)
Room was clean and staff were helpful

Reviewed on Feb 28, 2026

Wyndham San Diego Bayside
Embassy Suites by Hilton San Diego Bay Downtown

Embassy Suites by Hilton San Diego Bay Downtown

4 out of 5
601 Pacific Hwy San Diego CA
  • 29 min drive from San Ysidro Border Crossing
Book a stay at this family-friendly hotel in San Diego. Enjoy free breakfast, room service, and a fitness center. Our guests praise the breakfast and the helpful ...
9/10 Wonderful! (1,652 reviews)
Great

Reviewed on Feb 27, 2026

Embassy Suites by Hilton San Diego Bay Downtown
The Dana on Mission Bay

The Dana on Mission Bay

3.5 out of 5
1710 W Mission Bay Dr San Diego CA
  • 39 min drive from San Ysidro Border Crossing
Stay at this hotel in San Diego. Enjoy 2 outdoor pools, a marina, and 2 hot tubs. Our guests praise the pool and the restaurant in our reviews. Popular attractions ...
9/10 Wonderful! (4,123 reviews)
Friendly staff, clean room, comfortable beds. The daily resort fee and the price of parking were steep.

Reviewed on Feb 27, 2026

The Dana on Mission Bay
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Find cheap hotels in San Ysidro

You’re not an average traveler—and Hotwire knows it. Your wanderlust takes you off the beaten path to discover unique adventures and every travel destination’s lesser-known tourist scenes. Hotwire has the hookup! Book your San Ysidro hotel with Hotwire to complete your one-of-a-kind travel checklist.

For you, intrepid voyager, Hotwire has a large selection of the best hotels in San Ysidro.

Choosing the right hotel in California has everything to do with the way you want your trip to go. If you’ve scribbled a few obscure destinations on your itinerary, you probably already have a good sense of how your getaway is taking shape. Lean into that by booking one of San Ysidro’s 6,219 hotels. Choose the one that best catches your trip’s tourist drift.

If you’re traveling during the week for business, Hotwire can score you a luxury hotel for as low as $84. In town for pleasure? Hotwire still has you covered. If you’re in the mood for a quick last-minute weekend getaway or spa retreat, you can get great San Ysidro hotel deals at the last minute.

While traveling, where you stay plays a major role in your overall vacation enjoyment. Choosing the right hotel is just as important as making sure you book the right flight and car rental. If you’re traveling with family or friends, you may need to book a hotel with connecting rooms. If you enjoy an elegant and relaxing hotel ambiance, opt for one of Hotwire’s luxury hotels in San Ysidro. No matter your reason for visiting San Ysidro, with Hotwire’s large selection of hotels in the area, you’re sure to book a hotel that meets all your accommodation needs.

Frequently Asked Questions About San Ysidro hotels

Where can I find the best last-minute travel deals?

If you’re traveling in the spirit of spontaneity, you’ll love the idea of leaving your exact hotel choice up to chance. With Hotwire Hot Rates, you can unlock great deals on your next flight, hotel, or car rental. Just plug in your general preferences and let Hotwire choose last-minute hotel deals in San Ysidro for as low as $84.

How many hotels are there in San Ysidro?

With over 6,219 hotels in San Ysidro, you’re sure to find one that best matches your travel mood. When you book with Hotwire, you can score a stellar home away from home for as low as $84.

How to find cheap car rentals in San Ysidro?

Finding a cheap car rental deal in San Ysidro is as easy as scoring cheap hotels in San Ysidro. Hotwire partners with top-of-the-line car rental companies to bring you a large selection of affordable options. Whether you’re in need of a large SUV for the entire family or a more compact but stylish vehicle, Hotwire has you covered. You can unlock great car rental deals if you book a Hotwire Hot Rate at the last minute.